This page is an alternative interface to the Los Alamos National Laboratories' HIV sequence database, that allows completely custom queries in an NCBI-like query language. Sequences are returned in a FASTA format, with annotations based on your query. For example:

(C)[subtype] (SI)[phenotype] (gp41)[gene]

returns (at least) 75 sequences:

    >L22956(499) 	'subtype'='C'	'phenotype'='SI'
    atgagagtgagggggatactgaggaattgtcaacaatggtggatatggggcatc..
    >AF056123(48264) 	'subtype'='C'	'phenotype'='SI'
    ataattagatctgaaaatttgacaaacaatgtcaaaacaataatagtacatctt...
    >...
    ...
    

(The GenBank accession follows the >; the LANL sequence ID is in parentheses.)

If you have difficulties with this page, encounter bugs, or have a suggestion for an enhancement, please email me.

NOTE: The author is not affiliated with the Los Alamos National Laboratories, nor is this site associated with the Los Alamos National Laboratories. The author provides this site as a convenience to the research community only, and can only answer questions having to do with this interface. LANL's bioinformaticians can be contacted here.

All results provided by this software are for RESEARCH USE ONLY. The author makes ABSOLUTELY NO WARRANTY on their suitability for any application, and assumes no responsibility for any adverse consequences, including but not limited to adverse clinical consequences, in any situation involving the use of results obtained from this software.